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Table 5 Topological asymmetries for tree quartets (where one taxa was deleted)

From: Whole genome phylogeny of Gallus: introgression and data-type effects

Deletion

Sp. 1

Sp. 2

Sp. 3

Sp. 4

Topology 1 (12|34)

Topology 2a (14|23)

Topology 3a 13|24)

ΔTopology 2 and 3

G. lafayettii

B

V

G

S

2045

798

563

235

G. sonneratii

B

V

G

L

2033

809

564

245

G. gallus

B

V

S

L

2778

323

305

18

G. varius

B

G

S

L

2218

655

533

122

Bambusicola

V

G

S

L

2267

613

526

87

  1. aUnder the multispecies coalescent, topologies 2 and 3 should be equal