Table 1 Genome sequencing information of Hainan partridge
Insert size (bp) | Read length (bp) | Raw data | Clean data | ||||
|---|---|---|---|---|---|---|---|
Number of reads | Total bases (Gb) | Sequencing depth (x) | Number of reads | Total bases (Gb) | Sequencing depth (x) | ||
230 | 150 | 478,550,192 | 71.78 | 66.47 | 452,321,366 | 67.85 | 62.82 |
500 | 150 | 295,850,138 | 44.38 | 41.09 | 295,232,268 | 44.28 | 41.00 |
2000 | 150 | 304,989,286 | 45.75 | 42.36 | 301,915,562 | 45.29 | 41.93 |
5000 | 150 | 217,095,892 | 32.56 | 30.15 | 205,277,718 | 30.79 | 28.51 |
10,000 | 150 | 225,310,708 | 33.80 | 31.29 | 222,189,226 | 33.33 | 30.86 |