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Table 3 Descriptive statistics for the eight molecular loci used to construct phylogenetic relationships within the genus Liocichla

From: A multilocus molecular phylogeny for the avian genus Liocichla (Passeriformes: Leiothrichidae: Liocichla)

Locus Inheritance # Sequences Length (bp) Alleles s PI sites π (×10−3) Model
cytb Mitochondrial 11 400 10 68 51 72.95 TPM2uf + I
ND2 Mitochondrial 11 949 11 204 133 84.99 TrN + G
ND3 Mitochondrial 10 384 5 64 42 69.97 TPM3uf + G
FIB5 Autosomal 20 511 6 11 8 7.82 TIM3 + G
TGFB2 Autosomal 20 359 9 22 14 17.83 TrNef + I
12630 Autosomal 16 203 10 13 8 19.95 TPM2uf
14572 Autosomal 20 451 10 14 5 6.44 HKY + G
23361 Autosomal 16 397 5 11 6 8.35 HKY + I
  1. The summary includes the assumed inheritance, the number of sequences analyzed, the length of the sequences (in base pairs), the number of alleles, the number of segregating sites (s), the number of parsimony-informative sites (PI sites), nucleotide diversity (π), and the estimated best-fit nucleotide substitution model. Statistics are drawn from ingroup sequences only, whereas best-fit nucleotide substitution models were estimated with outgroups.