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Table 1 Bacteria isolated from various media conditions, and identified based on 16S rRNA gene sequencing analysis

From: The gut microbiome and metabolome of Himalayan Griffons (Gyps himalayensis): insights into the adaptation to carrion-feeding habits in avian scavengers

Type of medium

Number of isolates

Bacterial taxa identified

GenBank sequence submission

Phylum

Genus

Species

Strain name

Accession number

Luria–Bertani (LB) under aerobic condition

28

Proteobacteria

Escherichia

Escherichia coli

Escherichia coli strain HVul.ww1

MT740347

1

Firmicutes

Bacillus

Bacillus cereus

–

–

1

Actinobacteria

Micrococcus

Micrococcus luteus

Micrococcus luteus strain HVul.ww1

MT740350

1

Proteobacteria

Moraxella

Moraxella osloensis

Moraxella osloensis strain HVul.ww1

MT740351

Luria–Bertani (LB) under anaerobic condition

17

Firmicutes

Paeniclostridium

Paeniclostridium sordellii

Paeniclostridium sordellii strain HVul.ww1

MT740353

8

Firmicutes

Enterococcus

Enterococcus hirae

–

–

6

Firmicutes

Bacillus

Bacillus cereus

–

–

1

Proteobacteria

Escherichia

Escherichia coli

–

–

deMan-Rogosa-Sharpe (MRS) under aerobic condition

26

Proteobacteria

Escherichia

Escherichia coli

–

–

8

Firmicutes

Enterococcus

Enterococcus hirae

Enterococcus hirae strain HVul.ww1

MT740355

6

Firmicutes

Enterococcus

Enterococcus durans

Enterococcus durans HVul.ww1

MT740378

2

Firmicutes

Enterococcus

Enterococcus mundtii

Enterococcus mundtii strain HVul.ww1

MT740354

deMan-Rogosa-Sharpe (MRS) under anaerobic condition

10

Firmicutes

Enterococcus

Enterococcus hirae

–

–

5

Firmicutes

Enterococcus

Enterococcus mundtii

–

–

M17 under aerobic condition

23

Firmicutes

Enterococcus

Enterococcus faecium

–

–

5

Firmicutes

Bacillus

Bacillus cereus

–

–

3

Firmicutes

Bacillus

Bacillus simplex

–

–

2

Firmicutes

Solibacillus

Solibacillus silvestris

Solibacillus silvestris strain HVul.ww1

MW092231

Lactobacillus selection (LBS) under aerobic condition

22

Firmicutes

Enterococcus

Enterococcus faecium

Enterococcus faecium strain HVul.ww1

MW092229

5

Firmicutes

Bacillus

Bacillus simplex

Bacillus simplex strain HVul.ww1

MW092226

2

Firmicutes

Staphylococcus

Staphylococcus epidermidis

Staphylococcus epidermidis strain HVul.ww1

MW092514

1

Firmicutes

Bacillus

Bacillus licheniformis

Bacillus licheniformis strain HVul.ww1

MW092228

1

Firmicutes

Bacillus

Bacillus cereus

Bacillus cereus strain HVul.ww2

MW092227

Total

184

3

8

13

–

–