Skip to main content

Table 2 Data type has an impact on support and branch length estimates

From: Whole genome phylogeny of Gallus: introgression and data-type effects

Dataset

Total sites

Informative sites

Overall ratea

Branch A length (support)

Branch B length (support)

%Internal treelength

CNEEs

1089,711

541

0.201

0.00014 (99)

0.00013 (91)

6.82

Exons

8563,560

16,581

0.526

0.00078 (62)

0.00081 (89)

16.08

Introns

15,547,480

122,314

1.377

0.00186 (98)

0.00240 (100)

17.18

UCEs

7331,812

23,495

0.736

0.00095 (100)

0.00094 (100)

14.12

Combined

32,532,563

162,931

1.000

0.00141 (100)

0.00166 (100)

16.75

  1. aNormalized to the overall evolutionary rate of the combined dataset